Project summary

Wild koala populations in Australia are in steep decline throughout much of their northern geographic range. Koala retrovirus (KoRV) is strongly associated with immunodeficiency and related diseases, including chlamydia. Koala populations are also threatened by environmental factors and such factors are thought to intrinsically interlinked to KoRV load and disease. Environmental stress factors (heat waves, droughts and habitat degradation) likely impair the koala’s ability to control KoRV replication, which leads to further immune depletion in a negative feedback loop manifesting in disease.

Research conducted by A/Prof Chappell and Dr Blyton has made major contributions to the understanding of koala retrovirus including; (i) the first study to utilize deep sequencing to analyse KoRV diversity and increased the total number of available KoRV envelope sequences from 9 to 117; (ii) the first description of the piRNA response against KoRV; (iii) the first determination that exogenous KoRV is primarily maternally transmitted; (iv) the first demonstration of a statistically significant association between KoRV load and Chlamydia infections, multiple disease pathologies and overall poor body condition score; (v) A comprehensive analysis of KoRV biogeography throughout the entire geographic range of koala.

Publications

 

Evolution of KoRV-A transcriptional silencing in wild koalas

Yu, Tianxiong, Blyton, Michaela B.J., Abajorga, Milky, Koppetsch, Birgit S., Ho, Samantha, Xu, Bo, Hu, Zhongren, Luban, Jeremy, Chappell, Keith, Weng, Zhiping and Theurkauf, William E. (2025). Evolution of KoRV-A transcriptional silencing in wild koalas. Cell, 188 (8), 2081-2093. doi: 10.1016/j.cell.2025.02.006

Evolution of KoRV-A transcriptional silencing in wild koalas

Adaptive evolution of koala retrovirus transcription silencing and what it means for conservation

Chappell, Keith J., Blyton, Michaela B. J., Weng, Zhiping and Theurkauf, William E. (2025). Adaptive evolution of koala retrovirus transcription silencing and what it means for conservation. Clinical and Translational Medicine, 15 (7) e70343, 1-3. doi: 10.1002/ctm2.70343

Adaptive evolution of koala retrovirus transcription silencing and what it means for conservation

Blyton, Michaela D. J., Young, Paul R., Moore, Ben D. and Chappell, Keith J. (2022). Geographic patterns of koala retrovirus genetic diversity, endogenization, and subtype distributions. Proceedings of the National Academy of Sciences, 119 (33) e2122680119, 1-11. doi: 10.1073/pnas.2122680119

Joyce, Briony A., Blyton, Michaela D. J., Johnston, Stephen D., Young, Paul R. and Chappell, Keith J. (2021). Koala retrovirus genetic diversity and transmission dynamics within captive koala populations. National Academy of Sciences. Proceedings, 118 (38) e2024021118, e2024021118. doi: 10.1073/pnas.2024021118

The piRNA Response to Retroviral Invasion of the Koala Genome.

Yu T, Koppetsch BS, Pagliarani S, Johnston S, Silverstein NJ, Luban J, Chappell K, Weng Z, Theurkauf WE.Cell. 2019 Oct 17;179(3):632-643.e12. doi: 10.1016/j.cell.2019.09.002. Epub 2019 Oct 10.